PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004489383.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 92aa    MW: 10609.9 Da    PI: 9.3627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004489383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.6e-0724582054
                    HHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 20 feeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     ++Lr+l+P+ + + +s K+s + +L+++++YI+ L
  XP_004489383.1 24 VSKLRQLVPEiR-HRRSDKVSASKVLQETCNYIRTL 58
                    589*******77.89*******************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.226458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-81974IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.05E-82078IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-52458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MSSRRSRQQS SSSRISDEQI IELVSKLRQL VPEIRHRRSD KVSASKVLQE TCNYIRTLNR  60
EVDDLSERLS QLLTTIDADS PEANIIRSLI NQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004489383.11e-57PREDICTED: transcription factor PRE1
SwissprotQ9LJX11e-41PRE5_ARATH; Transcription factor PRE5
TrEMBLA0A0B2PV913e-50A0A0B2PV91_GLYSO; Transcription factor bHLH135
TrEMBLA0A0K2CT673e-50A0A0K2CT67_SOYBN; BHLH transcription factor (Fragment)
TrEMBLA0A0S3T7L73e-50A0A0S3T7L7_PHAAN; Uncharacterized protein
TrEMBLV7C1I43e-50V7C1I4_PHAVU; Uncharacterized protein
STRINGGLYMA13G05280.18e-50(Glycine max)
STRINGGLYMA19G02510.18e-50(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39860.12e-36bHLH family protein